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Malicious AGENTS.md File Hijacks Codex and Claude Code, Exposes Developer Secrets

Uday Patil Oct 26, 2026 17 min read 3 views
Malicious AGENTS.md File Hijacks Codex and Claude Code, Exposes Developer Secrets

An AGENTS.md attack found on a real developer machine has exposed a serious risk in AI coding agent security: a plain Markdown file placed in the Downloads folder can trick an AI assistant into installing malware or changing sensitive configuration settings.

Security researchers at Forever Security discovered the technique after stopping an AI coding agent that was attempting to install a malicious npm package called function-color. Their investigation traced the instruction to an unfamiliar AGENTS.md file stored in the customer’s Downloads directory.

In research published on October 22, 2026, Gal Weizman and Omer Samet demonstrated how similar attacks could manipulate OpenAI Codex and Claude Code. BleepingComputer reported the findings on October 25, bringing wider attention to the threat.

The danger is not that Markdown files execute code by themselves. Instead, AI coding assistants may treat instructions inside these files as trusted project guidance and use their existing tool permissions to carry out harmful actions.

Forever Security reproduced the Codex attack with a high success rate in its controlled tests. A separate Claude Code demonstration showed how malicious project instructions could redirect API traffic and expose OAuth credentials.

The original customer’s infection route remains unknown, and the researchers said they stopped the observed malicious installation attempt. However, they demonstrated separately that an attacker-controlled web page could place an instruction file in Downloads, creating a realistic opportunity for later agent hijacking.

For developers using autonomous coding tools, the immediate security lesson is simple: do not treat a downloaded project instruction file as trustworthy merely because an AI agent recognizes its name.

For broader coverage of autonomous systems and their security risks, see our AI Cyber Threats and Agentic Security Guide.

Table of Contents

Key Findings From the AGENTS.md Attack

  • Real-world detection: Forever Security stopped an AI coding agent from attempting to install the malicious npm package function-color.
  • Entry point: The suspicious instruction originated from an AGENTS.md file in the customer’s Downloads folder.
  • Codex testing: Researchers reproduced the technique against OpenAI Codex, reporting success in more than 90% of their controlled attempts.
  • Claude Code testing: A related CLAUDE.md technique redirected API traffic and exposed OAuth credentials in approximately half of laboratory tests.
  • Attack mechanism: Malicious project instructions persuaded agents to modify their own configuration and perform actions using existing privileges.
  • Important prerequisite: The agent must encounter and follow the planted instructions, commonly when launched from the affected working directory.
  • Defensive action: Avoid running agents from Downloads, inspect instruction files, review configuration changes and preserve approval and sandbox protections.

How a Malicious AGENTS.md File Can Hijack an AI Coding Agent

AI coding agents use instruction files to understand how they should work within a project.

For example, an AGENTS.md file can describe coding conventions, testing procedures, repository structure and preferred development tools.

This is useful because the agent can follow consistent project rules without developers repeating instructions in every session.

But the same feature can be abused when the file comes from an untrusted source.

Imagine a developer launching an AI assistant inside a folder that contains a malicious instruction document. The file might appear to describe ordinary engineering setup steps while actually telling the agent to change configuration files, install packages or contact an external service.

If the agent follows those instructions with sufficient permissions, a text document becomes an indirect way to trigger executable actions.

This is a form of prompt injection: attacker-controlled content crosses a trust boundary and influences an AI system’s behavior.

Unlike a traditional malicious executable, the Markdown file does not need to run independently. The coding agent acts as the execution mechanism.

The distinction matters because security tools that scan downloads for executable malware may not recognize an apparently ordinary engineering document as dangerous.

What Forever Security Found on a Customer’s Computer

The investigation began when Forever Security’s monitoring stopped a coding agent that was attempting to install function-color, an npm package associated with malicious activity.

The researchers investigated why the agent had attempted the installation.

They traced the instruction to a file named AGENTS.md inside the customer’s ~/Downloads folder.

Rather than containing obvious commands alone, the document presented the malicious steps as normal local development-environment preparation.

This made the instructions more convincing because AI coding tools commonly encounter legitimate project files describing setup requirements.

Forever Security said the malicious installation was blocked before it completed on the customer machine.

The company did not establish how the suspicious file originally entered that customer’s Downloads directory.

That uncertainty should not be confused with the researchers’ later laboratory demonstration, which separately tested a possible browser-based delivery path.

Why the Downloads Folder Is a Dangerous Working Directory

For many users, the Downloads folder is a mixture of files obtained from websites, email attachments, installers, archives and documents.

It is not normally treated as a trusted software project.

However, developers sometimes launch AI assistants there to inspect downloaded code, summarize documents, organize files or troubleshoot newly downloaded tools.

This creates an unusual overlap between two behaviors:

  • Browsers can save files from websites into the default Downloads directory.
  • AI coding agents may load applicable instruction files from the directory in which they operate.

When those behaviors meet, an attacker-controlled instruction file may be interpreted as legitimate project guidance.

Forever Security demonstrated that a web page could initiate a download of a file named AGENTS.md.

BleepingComputer independently tested the browser-delivery proof of concept and observed a harmless Markdown file being downloaded.

However, browsers such as Chrome, Edge and Firefox normally show download notifications. A background download should therefore not be described as universally invisible or guaranteed to succeed without any user awareness.

Most importantly, downloading the file does not automatically execute the attack.

The target must later run an applicable coding agent in a context where that malicious file is loaded and followed.

Codex Attack: How Rogue npm Packages Enter the Workflow

In the Codex scenario, the malicious instruction file presented itself as a routine engineering document.

It instructed the AI coding agent to register an additional project tooling service in its local configuration.

The supposed development tool relied on a malicious npm package.

The research showed how an agent could interpret this setup request as necessary preparation before completing the user’s actual task.

The attacker also attempted to make the configuration change persistent, so the unwanted tool registration would affect later Codex sessions.

This behavior is particularly dangerous because developers frequently permit AI coding agents to install dependencies and modify project files.

The researcher’s controlled tests reported success in more than 90% of attempts.

Most experiments used harmless proof-of-concept behavior, such as opening the calculator application. The researchers also tested the actual malicious package once inside an isolated virtual machine.

Those results demonstrate the attack’s feasibility under the researchers’ chosen conditions. They do not mean 90% of all Codex users are vulnerable or that the malware infected every tested environment.

Claude Code Attack: OAuth Token Theft Through Configuration Hijacking

The researchers also built a related attack against Claude Code.

This version used a malicious CLAUDE.md file rather than relying on the same npm installation mechanism used against Codex.

The injected instructions were framed as configuration requirements for an internal AI gateway.

In the controlled demonstration, Claude Code could be persuaded to change project settings so that API requests were directed toward a researcher-controlled endpoint.

That created a path for the agent’s OAuth authentication token to be exposed.

The researchers reported that they validated the token-replay risk and demonstrated how a malicious endpoint could influence subsequent tool behavior.

The observed success rate was approximately 50% in their laboratory testing.

Again, this was not evidence that half of real Claude Code installations have been compromised.

The finding illustrates a specific risk: a coding assistant with permission to modify its own connection settings can potentially be manipulated into trusting the wrong service.

For teams using authenticated AI development tools, this makes configuration integrity as important as protecting source-code repositories.

AGENTS.md vs CLAUDE.md: What Is the Difference?

Both are Markdown instruction files, but they are associated with different development workflows and agent implementations.

FileTypical RoleRisk in This Research
AGENTS.mdProject guidance for compatible coding agents, including Codex workflowsMalicious setup instructions can trigger unwanted configuration changes and package execution.
CLAUDE.mdProject-specific instructions for Claude CodeInjected instructions can influence settings and redirect authenticated API communication.

Neither filename is inherently malicious.

Legitimate projects commonly use such documents to improve developer productivity.

The security risk arises when untrusted instructions are accepted with more authority than they deserve.

A suspicious instruction file might request changes unrelated to the developer’s original task, especially modifications to authentication endpoints, global agent settings or approval mechanisms.

Those requests deserve independent review before an agent is permitted to carry them out.

Does This Mean Codex and Claude Code Have Unpatched Zero-Days?

The research does not establish a conventional, assigned zero-day vulnerability in either product.

Forever Security argues that the attack abuses normal agent behavior rather than a single software defect that can be repaired by updating one application version.

An agent reading project instructions and running approved tools is performing functions it was designed to support.

The security failure occurs when an attacker controls the instructions being read or convinces the agent to exceed the user’s intended permissions.

This does not mean vendors have no role in strengthening safety controls.

More restrictive permissions, trustworthy project boundaries, better configuration-change warnings and safer defaults can reduce exposure.

But readers should not expect one CVE number or one universal patch to resolve every prompt-injection attack against AI coding assistants.

That is why working-directory selection, instruction-file review and least-privilege execution remain important.

How Developers Can Check for Suspicious Agent Instructions

Users who run AI coding tools on macOS or Linux can begin with a simple, read-only review.

1. Check for instruction files in Downloads

find "$HOME/Downloads" -maxdepth 2 -type f \( -name 'AGENTS.md' -o -name 'CLAUDE.md' \) -print

This lists matching files. It does not delete, execute or classify them as malicious.

Finding a file with one of these names is not proof of compromise. Developers should inspect its origin and contents before deciding whether it is trustworthy.

2. Review Codex configuration

On systems using the standard Codex configuration location, inspect:

~/.codex/config.toml

Look for unexpected MCP server registrations, unfamiliar executables, unexplained package-installation steps and changes to service endpoints.

Do not execute an unknown entry simply to determine what it does.

3. Review Claude Code project settings

Inspect the relevant project’s:

.claude/settings.json

Look for unfamiliar API base URLs, proxies or other environment overrides that redirect authenticated requests.

Configuration files should be compared with trusted project baselines when possible.

4. Investigate suspicious npm activity

Review package-manager logs, process telemetry and recently installed dependencies for unexpected packages.

The research specifically identified the malicious npm package function-color.

Its presence in an installation record should be investigated, but the package name alone should not be treated as proof that every machine has executed the malicious payload.

5. Avoid unsafe testing

Do not copy suspicious instructions into a live AI-agent session or run unknown packages to see whether they are malicious.

Organizations investigating possible compromise should preserve evidence and use approved incident-response procedures.

How to Prevent AGENTS.md Prompt-Injection Attacks

Use Dedicated Project Directories

Launch AI coding agents from the root of a specific, reviewed software project rather than the Downloads folder or a broad home directory.

This reduces the chance that unrelated files obtained from websites will be treated as trusted project instructions.

Review New Instruction Files

Inspect unfamiliar AGENTS.md, CLAUDE.md and similar files before allowing an agent to process them.

Legitimate instructions should explain development tasks, not unexpectedly rewrite global settings or route credentials to unfamiliar services.

Keep Approval and Sandbox Controls Enabled

Avoid unrestricted command-execution modes for routine work.

Approval prompts provide an opportunity to notice unexpected package installations, configuration changes and sensitive file access.

Restrict Credential Access

Do not give coding agents access to every secret available on a developer workstation.

Use narrowly scoped tokens and short-lived credentials when possible.

Monitor Sensitive Configuration Changes

Watch for unexpected modifications to agent settings, MCP registrations and API endpoint configuration.

In enterprise environments, endpoint monitoring and configuration baselines can help identify changes outside approved workflows.

Respond to Possible Credential Exposure

If an OAuth token or other credential may have been transmitted to an unauthorized endpoint, revoke or rotate it using the provider’s approved account-security process.

Investigate whether the compromised credentials were used after exposure.

Why DevOps and CI/CD Teams Should Pay Attention

AI coding agents are increasingly used to generate code, install dependencies, inspect logs and automate development tasks.

Some environments also allow agents to interact with repositories, build systems and cloud resources.

This creates a trust-boundary problem.

A developer may authorize an assistant to help with a legitimate project, but the assistant can later encounter instructions originating from an attacker-controlled file.

If the assistant treats those instructions as equivalent to the developer’s request, it may use legitimate permissions for an unauthorized purpose.

The result can resemble a software supply-chain attack even when the initial payload is only a text document.

For infrastructure teams, this reinforces the importance of reviewing agent-executed commands, controlling package installations and restricting access to secrets.

Our separate GitHub Copilot CLI prompt-injection research describes a different technique involving hidden instructions and developer secrets. It is not the same AGENTS.md incident, but it illustrates the broader risks of autonomous coding workflows.

Confirmed vs Unknown: AGENTS.md Attack

Confirmed by the Researchers

  • Forever Security found a malicious AGENTS.md file on a real customer’s computer.
  • The file was linked to an attempted installation of the malicious npm package function-color.
  • The observed customer attack was stopped before the malicious installation completed.
  • The researchers reproduced a Codex attack using the discovered instruction-file technique.
  • Controlled Codex tests reported success in more than 90% of attempts.
  • A related Claude Code attack demonstrated OAuth credential exposure and API traffic redirection.
  • The Claude Code laboratory tests succeeded approximately half of the time.
  • Researchers demonstrated a separate browser-based path for placing an instruction file into Downloads.

Unknown or Not Established

  • How the malicious file originally entered the customer’s Downloads folder.
  • The number of real victims affected by the same instruction-file campaign.
  • That every browser download happens without visible notification.
  • That simply downloading an AGENTS.md file causes automatic code execution.
  • That 90% of all Codex users or 50% of all Claude Code users have been compromised.
  • That this research establishes a conventional unpatched CVE in either product.
  • That every AGENTS.md or CLAUDE.md file should be treated as malicious.

CyberUpdates365 Analysis

The most significant part of this research is how it turns ordinary development workflow features into a security problem.

Browsers routinely save downloaded files. Coding agents routinely read project instructions. Package managers routinely install tools requested during development.

Each feature can be legitimate on its own.

The danger emerges when an attacker-controlled document passes through the workflow and receives more authority than its source deserves.

That creates a risk different from traditional malware execution.

A malicious instruction file may not contain an executable payload at all. Instead, it persuades a trusted assistant to fetch software, modify settings or expose secrets.

For development organizations, the practical response is to reduce the authority of untrusted project content.

Instruction files from downloads and unfamiliar repositories should not be treated as instructions from the user or the security team.

Likewise, an AI assistant should not receive unrestricted permission to rewrite its own global configuration merely because a local document describes that change as necessary.

The research also shows why attack-success percentages require context.

Forever Security achieved strong results in controlled experiments, but those measurements reflect specific payloads, environments and testing conditions.

They should not be generalized into global compromise estimates.

Importantly, the attack does not require attackers to defeat the cryptography protecting AI service connections. It can instead attempt to redirect those connections through configuration manipulation.

That makes credential protection and configuration integrity essential elements of AI agent security.

The broader lesson is clear: an AI agent should execute a developer’s authorized task, not silently promote instructions from an untrusted downloaded file into administrative authority.

Research Evidence

  • Primary research: Forever Security.
  • Researchers: Gal Weizman and Omer Samet.
  • Original publication: October 22, 2026.
  • Additional reporting: BleepingComputer, October 25, 2026.
  • Initial observation: Attempted malicious npm package installation on a customer machine.
  • Instruction-file location: Downloads directory.
  • Observed npm package: function-color.
  • Tested assistants: OpenAI Codex and Claude Code.
  • Codex test result: More than 90% success in researcher-controlled attempts.
  • Claude Code test result: Approximately 50% success in the related laboratory scenario.
  • Primary security impact: Unauthorized package execution, agent configuration manipulation and possible credential exposure.
  • Initial delivery route: Not established for the real customer case.
  • Recommended protection: Trusted working directories, instruction-file review, restricted permissions and configuration monitoring.

Frequently Asked Questions

What is an AGENTS.md attack?

An AGENTS.md attack is a prompt-injection technique that uses malicious instructions in a project-guidance file to manipulate an AI coding agent into performing unauthorized actions.

Can AGENTS.md install malware by itself?

No. The Markdown file is not an executable. The risk arises when an AI agent reads it and follows malicious instructions using its own command-execution permissions.

Was the attack observed on a real computer?

Yes. Forever Security reported stopping an AI coding agent on a customer machine while it attempted to install the malicious npm package function-color.

Did Codex and Claude Code both fail the researchers’ tests?

The researchers demonstrated different attack techniques against both products. Controlled tests reported more than 90% success for the Codex scenario and approximately 50% for the Claude Code scenario.

Does visiting a website automatically compromise my AI agent?

No. A malicious download alone is not sufficient. The attack requires the agent to encounter and follow the planted instruction file, with permissions that allow the harmful action.

Is this a new CVE affecting OpenAI or Anthropic?

The reviewed research does not establish an assigned CVE. It describes prompt-injection and workflow risks arising from the interaction of downloaded files, agent instructions and available permissions.

How can I check my computer?

Review unfamiliar AGENTS.md or CLAUDE.md files in untrusted directories, inspect relevant agent configuration settings and investigate unexpected package installations or API endpoint changes.

What is the most important protection?

Run coding agents from a trusted project directory, review unfamiliar instructions and keep sandbox and approval controls enabled. Avoid broad file access and unnecessary permissions.

Final Takeaway

The AGENTS.md attack uncovered by Forever Security demonstrates how a plain-text instruction file can become a path to malware installation or credential exposure when an AI coding agent follows it with excessive trust.

The company stopped a real malicious package-installation attempt and subsequently reproduced related techniques against OpenAI Codex and Claude Code.

However, the research does not establish that every AI coding assistant is compromised or that an ordinary file download is sufficient to trigger the attack.

Developers should treat downloaded instruction files as untrusted input, keep agent permissions narrow and review unexpected changes to tools, packages and authentication settings.

Could a different AI coding assistant leak secrets through malicious instructions? Our related report examines another prompt-injection technique involving GitHub Copilot CLI and developer credentials.

Read: GitHub Copilot CLI Flaw Reportedly Leaks Developer Secrets →

Official Sources and Research

Uday Patil
About The Author

Uday Patil

Uday Patil is a Cybersecurity Researcher, DevSecOps Engineer, and the Founder of CyberUpdates365. Specializing in Threat Intelligence and Zero-Day vulnerability analysis, Uday is dedicated to breaking down complex cyber threats into actionable insights. His mission is to empower developers, security teams, and aspiring tech talent with rapid alerts, practical guidance, and career mentorship.